HIV/AIDS 2 ▲ Public Health Genomics Knowledge Base (v1.2)

Public Health Genomics Knowledge Base (v1.2)

Last Posted: Dec 22, 2016

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• A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.
  Anderson Tavis K et al. mSphere 1(6)
• Low abundance of colonic butyrate-producing bacteria in HIV infection is associated with microbial translocation and immune activation.
  Dillon Stephanie M et al. AIDS (London, England) 2016 Dec
• Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan.
  Chen Yue et al. PloS one 2016 (12) e0167839
• HLA-B*57 and IFNL4-related polymorphisms are associated with protection against HIV-1 disease progression in controllers.
  Dominguez-Molina B et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec
• Severity of Respiratory Syncytial Virus Lower Respiratory Tract Infection with Viral Coinfection in HIV-uninfected Children.
  Mazur Natalie I et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec
• The hepatitis C virus nonstructural protein 3 Q80K polymorphism is frequently detected and transmitted among HIV-infected MSM in the Netherlands.
  Newsum Astrid M et al. AIDS (London, England) 2017 Jan (1) 105-112
• HIV-1 drug resistance mutations emerging on darunavir therapy in PI-naive and -experienced patients in the UK.
  El Bouzidi Kate et al. The Journal of antimicrobial chemotherapy 2016 Dec (12) 3487-3494
• Identification of the transcripts associated with spontaneous HCV clearance in individuals co-infected with HIV and HCV.
  Chen Yue et al. BMC infectious diseases 2016 Nov (1) 693
• Use of whole genome sequencing in the Dutch Acute HCV in HIV study. A focus on transmitted antiviral resistance.
  Christiansen Mette T et al. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2016 Sep
• The rectal mucosa and condomless receptive anal intercourse in HIV-negative MSM: implications for HIV transmission and prevention.
  Kelley C F et al. Mucosal immunology 2016 Nov
• Understanding pneumococcal serotype 1 biology through population genomic analysis.
  Chaguza Chrispin et al. BMC infectious diseases 2016 Nov 16(1) 649
• Rapid Detection of Common HIV-1 Drug Resistance Mutations Using High Resolution Melting Analysis and Unlabelled Probes.
  Sacks David et al. Journal of clinical microbiology 2016 Oct
• Optimizing Infant HIV Diagnosis in Resource-Limited Settings: Modeling the Impact of HIV DNA PCR Testing at Birth.
  Chiu Alexander et al. Journal of acquired immune deficiency syndromes (1999) 2016 Dec 73(4) 454-462
• Novel pH sensing semiconductor for point-of-care detection of HIV-1 viremia.
  Gurrala R et al. Scientific reports 2016 Nov 36000
• Concurrency and HIV transmission network characteristics among MSM with recent HIV infection.
  Pines Heather A et al. AIDS (London, England) 2016 Nov (18) 2875-2883
• Identifying transmission clusters with Cluster Picker and HIV-TRACE.
  Rose Rebecca et al. AIDS research and human retroviruses 2016 Nov

more

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Most Recent Scientific Publications from Weekly Horizon Scans

From Genomics & Health Impact Scan Database

This database includes published scientific literature on evidence-based translation of genomic discoveries into improved health care and disease prevention that have a potential impact on population health.

• A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.
  Anderson Tavis K et al. mSphere 1(6)
• Severity of Respiratory Syncytial Virus Lower Respiratory Tract Infection with Viral Coinfection in HIV-uninfected Children.
  Mazur Natalie I et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec
• Understanding pneumococcal serotype 1 biology through population genomic analysis.
  Chaguza Chrispin et al. BMC infectious diseases 2016 Nov 16(1) 649
• The rectal mucosa and condomless receptive anal intercourse in HIV-negative MSM: implications for HIV transmission and prevention.
  Kelley C F et al. Mucosal immunology 2016 Nov
• Optimizing Infant HIV Diagnosis in Resource-Limited Settings: Modeling the Impact of HIV DNA PCR Testing at Birth.
  Chiu Alexander et al. Journal of acquired immune deficiency syndromes (1999) 2016 Dec 73(4) 454-462

more

From Advanced Molecular Detection Clips Database

This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions.

• Low abundance of colonic butyrate-producing bacteria in HIV infection is associated with microbial translocation and immune activation.
  Dillon Stephanie M et al. AIDS (London, England) 2016 Dec
• Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan.
  Chen Yue et al. PloS one 2016 (12) e0167839
• HLA-B*57 and IFNL4-related polymorphisms are associated with protection against HIV-1 disease progression in controllers.
  Dominguez-Molina B et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Dec
• The hepatitis C virus nonstructural protein 3 Q80K polymorphism is frequently detected and transmitted among HIV-infected MSM in the Netherlands.
  Newsum Astrid M et al. AIDS (London, England) 2017 Jan (1) 105-112
• Identification of the transcripts associated with spontaneous HCV clearance in individuals co-infected with HIV and HCV.
  Chen Yue et al. BMC infectious diseases 2016 Nov (1) 693

more