Query Trace: Microbiome[orginal query]
| Genetic effects on the commensal microbiota in inflammatory bowel disease patients. PLoS genetics 2019 Mar 15 (3): e1008018. Aschard Hugues, Laville Vincent, Tchetgen Eric Tchetgen, Knights Dan, Imhann Floris, Seksik Philippe, Zaitlen Noah, Silverberg Mark S, Cosnes Jacques, Weersma Rinse K, Xavier Ramnik, Beaugerie Laurent, Skurnik David, Sokol Har  |
| SLC39A8 missense variant is associated with Crohn's disease but does not have a major impact on gut microbiome composition in healthy subjects. PloS one 2019 14 (1): e0211328. Collij Valerie, Imhann Floris, Vich Vila Arnau, Fu Jingyuan, Dijkstra Gerard, Festen Eleonora A M, Voskuil Michiel D, Daly Mark J, Xavier Ramnik J, Wijmenga Cisca, Zhernakova Alexandra, Weersma Rinse |
| Population-level analysis of Gut 2018 Aug . Tito Raul Y, Chaffron Samuel, Caenepeel Clara, Lima-Mendez Gipsi, Wang Jun, Vieira-Silva Sara, Falony Gwen, Hildebrand Falk, Darzi Youssef, Rymenans Leen, Verspecht Chloë, Bork Peer, Vermeire Severine, Joossens Marie, Raes Jero  |
| The Interplay between Oral Microbiome, Lifestyle Factors, and Genetic Polymorphisms in the Risk of Oral Squamous Cell Carcinoma. Carcinogenesis 2018 Apr . Hsiao Jenn-Ren, Chang Chan-Chi, Lee Wei-Ting, Huang Cheng-Chih, Ou Chun-Yen, Tsai Sen-Tien, Chen Ken-Chung, Huang Jehn-Shyun, Wong Tung-Yiu, Lai Yu-Hsuan, Wu Yuan-Hua, Hsueh Wei-Ting, Wu Shang-Yin, Yen Chia-Jui, Chang Jang-Yang, Lin Chen-Lin, Weng Ya-Ling, Yang Han-Chien, Chen Yu-Shan, Chang Jeffrey  |
| Genetic variants in cellular transport do not affect mesalamine response in ulcerative colitis. PloS one 2018 13 (3): e0192806. Moran Christopher J, Huang Hailiang, Rivas Manuel, Kaplan Jess L, Daly Mark J, Winter Harland  |
| Necrotizing enterocolitis and high intestinal iron uptake due to genetic variants. Pediatric research 2017 Aug . Göpel Wolfgang, Drese Josephine, Rausch Tanja K, Twisselmann Nele, Bohnhorst Bettina, Müller Andreas, Franz Axel, Ziegler Andreas, Härtel Christoph, Herting Egbe  |
A genome-wide association study identifies nucleotide variants at SIGLEC5 and DEFA1A3 as risk loci for periodontitis.  Human molecular genetics 2017 Jul 26 (13): 2577-2588. Munz Matthias, Willenborg Christina, Richter Gesa M, Jockel-Schneider Yvonne, Graetz Christian, Staufenbiel Ingmar, Wellmann Jürgen, Berger Klaus, Krone Bastian, Hoffmann Per, van der Velde Nathalie, Uitterlinden André G, de Groot Lisette C P G M, Sawalha Amr H, Direskeneli Haner, Saruhan-Direskeneli Güher, Guzeldemir-Akcakanat Esra, Keceli Gencay, Laudes Matthias, Noack Barbara, Teumer Alexander, Holtfreter Birte, Kocher Thomas, Eickholz Peter, Meyle Jörg, Doerfer Christof, Bruckmann Corinna, Lieb Wolfgang, Franke Andre, Schreiber Stefan, Nohutcu Rahime M, Erdmann Jeanette, Loos Bruno G, Jepsen Soeren, Dommisch Henrik, Schaefer Arne  |
| Confounding effects of microbiome on the susceptibility of TNFSF15 to Crohn's disease in the Ryukyu Islands. Human genetics 2017 Feb . Nakagome Shigeki, Chinen Hiroshi, Iraha Atsushi, Hokama Akira, Takeyama Yasuaki, Sakisaka Shotaro, Matsui Toshiyuki, Kidd Judith R, Kidd Kenneth K, Said Heba S, Suda Wataru, Morita Hidetoshi, Hattori Masahira, Hanihara Tsunehiko, Kimura Ryosuke, Ishida Hajime, Fujita Jiro, Kinjo Fukunori, Mano Shuhei, Oota Hiro  |
| The effect of host genetics on the gut microbiome. Nature genetics 2016 Nov 48 (11): 1407-1412. Bonder Marc Jan, Kurilshikov Alexander, Tigchelaar Ettje F, Mujagic Zlatan, Imhann Floris, Vila Arnau Vich, Deelen Patrick, Vatanen Tommi, Schirmer Melanie, Smeekens Sanne P, Zhernakova Daria V, Jankipersadsing Soesma A, Jaeger Martin, Oosting Marije, Cenit Maria Carmen, Masclee Ad A M, Swertz Morris A, Li Yang, Kumar Vinod, Joosten Leo, Harmsen Hermie, Weersma Rinse K, Franke Lude, Hofker Marten H, Xavier Ramnik J, Jonkers Daisy, Netea Mihai G, Wijmenga Cisca, Fu Jingyuan, Zhernakova Alexand  |
| Association of host genome with intestinal microbial composition in a large healthy cohort. Nature genetics 2016 Oct . Turpin Williams, Espin-Garcia Osvaldo, Xu Wei, Silverberg Mark S, Kevans David, Smith Michelle I, Guttman David S, Griffiths Anne, Panaccione Remo, Otley Anthony, Xu Lizhen, Shestopaloff Konstantin, Moreno-Hagelsieb Gabriel, , Paterson Andrew D, Croitoru Kenne  |
| Atopic Dermatitis Susceptibility Variants In Filaggrin Hitchhike Hornerin Selective Sweep. Genome biology and evolution 2016 Sep . Eaaswarkhanth Muthukrishnan, Xu Duo, Flanagan Colin, Rzhetskaya Margarita, Hayes M Geoffrey, Blekhman Ran, Jablonski Nina, Gokcumen Om  |
| A pleiotropic missense variant in SLC39A8 is associated with Crohn's disease and human gut microbiome composition. Gastroenterology 2016 Aug . Li Dalin, Achkar Jean-Paul, Haritunians Talin, Jacobs Jonathan P, Hui Ken Y, D'Amato Mauro, Brand Stephan, Radford-Smith Graham, Halfvarson Jonas, Niess Jan-Hendrik, Kugathasan Subra, Büning Carsten, Schumm L Philip, Klei Lambertus, Ananthakrishnan Ashwin, Aumais Guy, Baidoo Leonard, Dubinsky Marla, Fiocchi Claudio, Glas Jürgen, Milgrom Raquel, Proctor Deborah D, Regueiro Miguel, Simms Lisa A, Stempak Joanne M, Targan Stephan R, Törkvist Leif, Sharma Yashoda, Devlin Bernie, Borneman James, Hakonarson Hakon, Xavier Ramnik J, Daly Mark, Brant Steven R, Rioux John D, Silverberg Mark S, Cho Judy H, Braun Jonathan, McGovern Dermot Pb, Duerr Richard  |
| FUT2 genotype influences lung function, exacerbation frequency and airway microbiota in non-CF bronchiectasis. Thorax 2016 Aug . Taylor Steven L, Woodman Richard J, Chen Alice Ch, Burr Lucy D, Gordon David L, McGuckin Michael A, Wesselingh Steve, Rogers Geraint  |
| Sex differences in immune responses. Nature reviews. Immunology 2016 Aug . Klein Sabra L, Flanagan Katie  |
| Gene-microbiota interactions contribute to the pathogenesis of inflammatory bowel disease. Science (New York, N.Y.) 2016 May 352 (6289): 1116-20. Chu Hiutung, Khosravi Arya, Kusumawardhani Indah P, Kwon Alice H K, Vasconcelos Anilton C, Cunha Larissa D, Mayer Anne E, Shen Yue, Wu Wei-Li, Kambal Amal, Targan Stephan R, Xavier Ramnik J, Ernst Peter B, Green Douglas R, McGovern Dermot P B, Virgin Herbert W, Mazmanian Sarkis  |
| Genome-Wide Studies of Type 2 Diabetes and Lipid Traits in Hispanics. Current diabetes reports 2016 May 16 (5): 41. Below Jennifer E, Parra Esteban  |
| Urban Dust Microbiome: Impact on Later Atopy and Wheezing. Environmental health perspectives 2016 May . Tischer Christina, Weikl Fabian, Probst Alexander J, Standl Marie, Heinrich Joachim, Pritsch Kar |
| Association of primary open-angle glaucoma with mitochondrial variants and haplogroups common in African Americans. Molecular vision 2016 22 454-71. Collins David W, Gudiseva Harini V, Trachtman Benjamin, Bowman Anita S, Sagaser Anna, Sankar Prithvi, Miller-Ellis Eydie, Lehman Amanda, Addis Victoria, O'Brien Joan  |
| Gene expression profiling gut microbiota in different races of humans. Scientific reports 2016 6 23075. Chen Lei, Zhang Yu-Hang, Huang Tao, Cai Yu-Do  |
| Role of Helicobacter pylori and interleukin 6 -174 gene polymorphism in dyslipidemia: a case-control study. BMJ open 2016 6 (1): e009987. Pohjanen Vesa-Matti, Koivurova Olli-Pekka, Niemelä Seppo E, Karttunen Riitta A, Karttunen Tuomo |
| The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data. PeerJ 2016 4 e2571. Joseph Sandeep J, Li Ben, Petit Iii Robert A, Qin Zhaohui S, Darrow Lyndsey, Read Timothy  |
| The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood Lipids. Circulation research 2015 Sep . Fu Jingyaun, Bonder Marc Jan, Cenit María Carmen, Tigchelaar Ettje, Maatman Astrid, Dekens Jackie A M, Brandsma Eelke, Marczynska Joanna, Imhann Floris, Weersma Rinse K, Franke Lude, Poon Tiffany W, Xavier Ramnik J, Gevers Dirk, Hofker Marten H, Wijmenga Cisca, Zhernakova Alexand  |
| Association of Fusobacterium species in pancreatic cancer tissues with molecular features and prognosis. Oncotarget 2015 Mar 6 (9): 7209-20. Mitsuhashi Kei, Nosho Katsuhiko, Sukawa Yasutaka, Matsunaga Yasutaka, Ito Miki, Kurihara Hiroyoshi, Kanno Shinichi, Igarashi Hisayoshi, Naito Takafumi, Adachi Yasushi, Tachibana Mami, Tanuma Tokuma, Maguchi Hiroyuki, Shinohara Toshiya, Hasegawa Tadashi, Imamura Masafumi, Kimura Yasutoshi, Hirata Koichi, Maruyama Reo, Suzuki Hiromu, Imai Kohzoh, Yamamoto Hiroyuki, Shinomura Yasuhi  |
| GENETIC POLYMORPHISMS OF HUMAN ?-DEFENSINS IN PATIENTS WITH MULTIPLE SCLEROSIS. Ideggyo?gya?szati szemle 2015 Mar 68 (3-4): 127-33. Szekeres Márta, Somogyvári Ferenc, Bencsik Krisztina, Szolnoki Zoltán, Vécsei László, Mándi Yvet |
| The HLA-DQ2 genotype selects for early intestinal microbiota composition in infants at high risk of developing coeliac disease. Gut 2015 Mar 64 (3): 406-17. Olivares M, Neef A, Castillejo G, Palma G De, Varea V, Capilla A, Palau F, Nova E, Marcos A, Polanco I, Ribes-Koninckx C, Ortigosa L, Izquierdo L, Sanz  |
| Genetic associations and shared environmental effects on the skin microbiome of Korean twins. BMC genomics 2015 16 (1): 992. Si Jiyeon, Lee Sunghee, Park Jin Mo, Sung Joohon, Ko GwangP |
| Genome-Wide Association Studies of the Human Gut Microbiota. PloS one 2015 10 (10): e0140301. Davenport Emily R, Cusanovich Darren A, Michelini Katelyn, Barreiro Luis B, Ober Carole, Gilad Yo  |
| Microbiome and Gluten. Annals of nutrition & metabolism 2015 67 Suppl 2 28-41. Sanz Yolan |
| Oxidative Stress Parameters in Saliva and Its Association with Periodontal Disease and Types of Bacteria. Disease markers 2015 2015 653537. Almerich-Silla Jose Manuel, Montiel-Company Jose María, Pastor Sara, Serrano Felipe, Puig-Silla Miriam, Dasí Francis |
| Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries. Microbiome 2015 3 (1): 69. Rudney Joel D, Jagtap Pratik D, Reilly Cavan S, Chen Ruoqiong, Markowski Todd W, Higgins LeeAnn, Johnson James E, Griffin Timothy  |
| Effect of antibiotic use and mold exposure in infancy on allergic rhinitis in susceptible adolescents. Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology 2014 Aug 113 (2): 160-165.e1. Yang Song-I, Lee Eun, Jung Young-Ho, Kim Hyung Young, Seo Ju-Hee, Kwon Ji-Won, Kim Byoung-Ju, Kim Hyo-Bin, Lee So-Yeon, Jang Gwang Cheon, Kim Woo-Kyung, Shim Jung Yeon, Kang Mi-Jin, Yu Ho-Sung, Hong Soo-Jo  |
| Peptidoglycan recognition protein genes and risk of Parkinson's disease. Movement disorders : official journal of the Movement Disorder Society 2014 Aug 29 (9): 1171-80. Goldman Samuel M, Kamel Freya, Ross G Webster, Jewell Sarah A, Marras Connie, Hoppin Jane A, Umbach David M, Bhudhikanok Grace S, Meng Cheryl, Korell Monica, Comyns Kathleen, Hauser Robert A, Jankovic Joseph, Factor Stewart A, Bressman Susan, Lyons Kelly E, Sandler Dale P, Langston J William, Tanner Caroline |
| Current status and prospects of intestinal microbiome studies. Intestinal research 2014 Jul 12 (3): 178-83. Han Dong S |
| Genomic ATG16L1 risk allele-restricted Paneth cell ER stress in quiescent Crohn's disease. Gut 2014 Jul 63 (7): 1081-91. Deuring J Jasper, Fuhler Gwenny M, Konstantinov Sergey R, Peppelenbosch Maikel P, Kuipers Ernst J, de Haar Colin, van der Woude C Janne |
| Functional characterisation of a SNP in the ABCC11 allele - effects on axillary skin metabolism, odour generation and associated behaviours. Journal of dermatological science 2014 Jan 73 (1): 23-30. Harker Mark, Carvell Ann-Marie, Marti Vernon P J, Riazanskaia Svetlana, Kelso Hailey, Taylor David, Grimshaw Sally, Arnold David S, Zillmer Ruediger, Shaw Jane, Kirk Jayne M, Alcasid Zee M, Gonzales-Tanon Sheila, Chan Gertrude P, Rosing Egge A E, Smith Adrian |
| Additive effect between IL-13 polymorphism and cesarean section delivery/prenatal antibiotics use on atopic dermatitis: a birth cohort study (COCOA). PloS one 2014 9 (5): e96603. Lee So-Yeon, Yu Jinho, Ahn Kang-Mo, Kim Kyung Won, Shin Youn Ho, Lee Kyung-Shin, Hong Seo Ah, Jung Young-Ho, Lee Eun, Yang Song-I, Seo Ju-Hee, Kwon Ji-Won, Kim Byoung-Ju, Kim Hyo-Bin, Kim Woo-Kyung, Song Dae Jin, Jang Gwang Cheon, Shim Jung Yeon, Lee Soo-Young, Kwon Ja-Young, Choi Suk-Joo, Lee Kyung-Ju, Park Hee Jin, Won Hye-Sung, Yoo Ho-Sung, Kang Mi-Jin, Kim Hyung-Young, Hong Soo-Jo |
| Copy number variation of the beta defensin gene cluster on chromosome 8p influences the bacterial microbiota within the nasopharynx of otitis-prone children. PloS one 2014 9 (5): e98269. Jones Eric A, Kananurak Anchasa, Bevins Charles L, Hollox Edward J, Bakaletz Lauren |
| Genetic risk factors for Clostridium difficile infection in ulcerative colitis. Alimentary pharmacology & therapeutics 2013 Sep 38 (5): 522-30. Ananthakrishnan A N, Oxford E C, Nguyen D D, Sauk J, Yajnik V, Xavier R  |
| Genome-wide association study of periodontal pathogen colonization. Journal of dental research 2012 Jul 91 (7 Suppl): 7 Suppl. Divaris K, Monda KL, North KE, Olshan AF, Lange EM, Moss K, Barros SP, Beck JD, Offenbacher S |
| Assessment of colorectal cancer molecular features along bowel subsites challenges the conception of distinct dichotomy of proximal versus distal colorectum. Gut 2012 Jun 61 (6): 847-54. Yamauchi Mai, Morikawa Teppei, Kuchiba Aya, Imamura Yu, Qian Zhi Rong, Nishihara Reiko, Liao Xiaoyun, Waldron Levi, Hoshida Yujin, Huttenhower Curtis, Chan Andrew T, Giovannucci Edward, Fuchs Charles, Ogino Shu |
| Enteric microbiome metabolites correlate with response to simvastatin treatment. PloS one 2011 6 (10): e25482. Kaddurah-Daouk Rima, Baillie Rebecca A, Zhu Hongjie, Zeng Zhao-Bang, Wiest Michelle M, Nguyen Uyen Thao, Wojnoonski Katie, Watkins Steven M, Trupp Miles, Krauss Ronald |
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