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- Dynamics of RT-qPCR SARS-CoV-2 Detection Rates Prior to and After Symptom Onset
SS Mix, MEDRXIV< July 11, 2020
- Saliva offers a sensitive, specific and non-invasive alternative to upper respiratory swabs for SARS-CoV-2 diagnosis.
RL Byrne et al MEDRXIV, July 11, 2020 We collected 145 paired saliva and nasal/throat (NT) swabs at diagnosis (day 0) and repeated on day 2 and day 7 dependent on inpatient care and day 28 for study follow up. Self-collected saliva samples were found to be consistent, and in some cases superior when compared to healthcare worker collected NT swabs. - The link between Vitamin D and Covid-19: distinguishing facts from fiction.
Bergman Peter, et al. Journal of internal medicine 2020 7 0. - Gene expression pattern differences in primary human pulmonary epithelial cells infected with MERS-CoV or SARS-CoV-2.
Jang Yunyueng, et al. Archives of virology 2020 7 0. - Energetics and IC50 based epitope screening in SARS CoV-2 (COVID 19) spike protein by immunoinformatic analysis implicating for a suitable vaccine development.
Banerjee Amrita, et al. Journal of translational medicine 2020 7 0. (1) 281 - CRISPRing for host genes regulating SARS-CoV-2.
Lu Fangfang, et al. Nature reviews. Immunology 2020 7 0. - Lack of sensitivity of an IVD/CE-labeled kit targeting the S gene for detection of SARS-CoV-2.
Matzkies Lucie-Marie, et al. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2020 7 0. - Rapid Large-Scale COVID-19 Testing During Shortages.
Beetz Christian, et al. Diagnostics (Basel, Switzerland) 2020 7 0. (7) 
- Molecular analysis of binding region of an ACE2 as a receptor for SARS-CoV-2 between humans and mammals
T Hayashi et al, BIRXIV, July 10, 2020 - Discriminating Mild from Critical COVID-19 by Innate and Adaptive Immune Single-cell Profiling of Bronchoalveolar Lavages
E Wauters et al, BIORXIV, July 10, 2020 - Genomic variations in SARS-CoV-2 genomes from Gujarat: Underlying role of variants in disease epidemiology
M Joshi et al, BIORXIV, July 10, 2020 - Portable and accurate diagnostics for COVID-19: Combined use of the miniPCR thermocycler and a well-plate reader for SARS-CoV-2 virus detection
E Gonzales-Gonzales et al, MEDRXIV, July 10, 2020 - The diagnostic accuracy of nucleic acid point-of-care tests for human coronavirus: A systematic review and meta-analysis
P Subsoontorn et al, MEDRXIV, July 11, 2020 - Genomic epidemiology reveals multiple introductions and spread of SARS-CoV-2 in the Indian state of Karnataka
C Pittabiraman et al, MEDRXIV, July 11, 2020 - Commercial SARS-CoV-2 Molecular Assays: Superior Analytical Sensitivity of cobas SARS-CoV-2 Relative to NxTAG Cov Extended Panel and ID NOW COVID-19 Test.
Jin Run, et al. Archives of pathology & laboratory medicine 2020 7 0. - Natural transmission of bat-like SARS-CoV-2PRRA variants in COVID-19 patients.
Wong Yik Chun, et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 7 0. - Molecular mechanisms of sex bias differences in COVID-19 mortality.
Li Yuchong, et al. Critical care (London, England) 2020 7 0. (1) 405
- Evolving geographic diversity in SARS-CoV2 and in silico analysis of replicating enzyme 3CL pro targeting repurposed drug candidates.
Chitranshi Nitin, et al. Journal of translational medicine 2020 7 0. (1) 278 - Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Early Manifestations of COVID-19 in Israel.
Cohen-Gihon Inbar, et al. Microbiology resource announcements 2020 7 0. (28) - Coding-Complete Genome Sequence of SARS-CoV-2 Isolate from Bangladesh by Sanger Sequencing.
Moniruzzaman M, et al. Microbiology resource announcements 2020 7 0. (28) - Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling.
Rockett Rebecca J, et al. Nature medicine 2020 7 0.
- Mutation Patterns of Human SARS-CoV-2 and Bat RaTG13 Coronavirus Genomes Are Strongly Biased Towards C>U Transitions, Indicating Rapid Evolution in Their Hosts.
Matyášek Roman, et al. Genes 2020 7 0. (7) - Protein Coding and Long Noncoding RNA (lncRNA) Transcriptional Landscape in SARS-CoV-2 Infected Bronchial Epithelial Cells Highlight a Role for Interferon and Inflammatory Response.
Vishnubalaji Radhakrishnan, et al. Genes 2020 7 0. (7) - Implications of SARS-CoV-2 Mutations for Genomic RNA Structure and Host microRNA Targeting.
Hosseini Rad Sm Ali, et al. International journal of molecular sciences 2020 7 0. (13)
- Rigorous wildlife disease surveillance
M Watsa et al, Science July 10, 2020 - Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling
RJ Rocket et al, Nature Medicine, July 9, 2020Here we examine the added value of near real-time genome sequencing of SARS-CoV-2 in a subpopulation of infected patients during the first 10 weeks of COVID-19 containment in Australia and compare findings from genomic surveillance with predictions of a computational agent-based model (ABM). - The mathematical strategy that could transform coronavirus testing- Four charts show how pooling samples from many people can save time or resources.
Nature News, July 10, 2020There are many ways to conduct group testing, and scientists in several countries are experimenting with the best method for doing this during a pandemic. Their ideas largely come from a field of mathematics known as group testing, which has been widely used — from detecting faulty Christmas-tree lights to estimating the prevalence of HIV in a population. - Post-lockdown detection of SARS-CoV-2 RNA in the wastewater of Montpellier, France
J Trottier et al, MEDRXIV, July 9, 2020 - New genomic data studies launch to combat Covid-19
Genetics Education Program, July 9, 2020 - Tackling COVID-19 infection through complement-targeted immunotherapy.
Jodele Sonata, et al. British journal of pharmacology 2020 7 0.
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