Genome sequencing | https://phgkb.cdc.gov/GAPPKB/phgHome.do | Updates on Specific Topics

https://phgkb.cdc.gov/GAPPKB/phgHome.do

From From Advanced Molecular Detection Clips Database

This database includes published scientific literature, popular press articles, tools, and databases on the emerging role of pathogen genomics and host-pathogen interactions in infectious disease control and prevention. It includes information on methods, evolution and pathogenicity, detection and diagnosis, outbreaks, epidemiology and transmission, antimicrobials, and vaccines and host-pathogen interactions.

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• High-throughput whole genome sequencing of Porcine reproductive and respiratory syndrome virus from cell culture materials and clinical specimens using next-generation sequencing technology.  
  Zhang Jianqiang et al. Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc 2017 Jan (1) 41-50
• Whole Genome Sequencing reveals the contribution of long-term carriers in Staphylococcus aureus outbreak investigation.  
  Gordon N C et al. Journal of clinical microbiology 2017 May
• Complete genome sequencing and clinical analysis of intrahepatic hepatitis B virus cccDNA from HCC.  
  Jiao Fengping et al. Microbial pathogenesis 2017 May
• Whole Genome Sequencing Accurately Identifies Resistance to Extended Spectrum β-Lactams for Major Gram-Negative Bacterial Pathogens.  
  Shelburne Samuel A et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 May
• Whole genome sequencing of group A Streptococcus: development and evaluation of an automated pipeline for emmgene typing.  
  Kapatai Georgia et al. PeerJ 2017 e3226

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