Tuberculosis UPDATE || Public Health Genomics Knowledge Base (v1.0) || July 7-14, 2016

Public Health Genomics Knowledge Base (v1.0)



July 7-14, 2016 




Last Updated: Jul 07, 2016

• Polymorphisms in the Pattern Recognition Receptor Mincle Gene (CLEC4E) and Association with Tuberculosis.
  Bowker Nicholas, et al. Lung 2016 6
• Molecular and Growth-Based Drug Susceptibility Testing of Mycobacterium tuberculosis Complex for Ethambutol Resistance in the United States.
  Yakrus Mitchell A et al. Tuberculosis research and treatment 2016 3404860
• Deciphering the recent phylogenetic expansion of the originally deeply rooted Mycobacterium tuberculosis lineage 7.
  Yimer Solomon A, Namouchi Amine, Zegeye Ephrem Debebe, Holm-Hansen Carol, Norheim Gunnstein, Abebe Markos, Aseffa Abraham, Tønjum Tone.BMC evolutionary biology 2016 (1) 146
• The role of variants from the innate immune system genes in tuberculosis and skin test response in a Native American population.
  Lindenau Juliana D, et al. Human immunology 2016 6
• Human tuberculosis caused by Mycobacterium bovis in the United States, 2006-2013.
  Scott Colleen et al. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Jun
• Association of polymorphisms of the transporter associated with antigen processing (TAP2) gene with pulmonary tuberculosis in an elderly Japanese population.
  Thu Kaung Si, et al. APMIS : acta pathologica, microbiologica, et immunologica Scandinavica 2016 6
• Association of DC-SIGN and DC-SIGNR Repeat Regions with Susceptibility to Pulmonary Tuberculosis in Zahedan, Southeastern Iran.
  Naderi Mohammad, et al. Acta medica Iranica 2016 5 (5) 308-12
• Role of polymorphic bile salt export pump (BSEP, ABCB11) transporters in anti-tuberculosis drug-induced liver injury in a Chinese cohort.
  Chen Ru, et al. Scientific reports 2016 0 27750
• Drug resistance and associated genetic mutations among patients with suspected MDR-TB in Uttar Pradesh, India.
  Jain A, et al. The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2016 7 (7) 870-5
• Xpert(®) MTB/RIF detection of rifampin resistance and time to treatment initiation in Harare, Zimbabwe.
  Metcalfe J Z, et al. The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2016 7 (7) 882-9
• Whole-genome sequencing of Mycobacterium tuberculosis for rapid diagnostics: feasibility of a decentralised model.
  Martinez Elena, Bustamante Andrea, Menon Ranjeeta, Wang Qinning, Jelfs Peter, Marais Ben, Chen Sharon C-A, Sintchenko Vitali.The Lancet. Respiratory medicine 2016 Apr (4) e13-e14
• Pathogen genomics used to determine the end of TB outbreak in landmark research
  J Harris, PHG Foundation, June 15, 2016
• Emergence and genetic characteristics of pyrazinamide resistant tuberculosis in China, a multi-center study.
  Li Dange, Hu Yi, Werngren Jim, Mansjö Mikael, Zheng Xubin, Drobniewski Francis, Hoffner Sven, Xu Biao.Antimicrobial agents and chemotherapy 2016 Jun
• Novel high throughput pooled shRNA screening identifies NQO1 as a potential drug target for host directed therapy for tuberculosis.
  Li Qing, Karim Ahmad F, Ding Xuedong, Das Biswajit, Dobrowolski Curtis, Gibson Richard M, Quiñones-Mateu Miguel E, Karn Jonathan, Rojas Roxana E.Scientific reports 2016 27566
• Genetic Polymorphisms of Glutathione S-Transferase P1 (GSTP1) and the Incidence of Anti-Tuberculosis Drug-Induced Hepatotoxicity.
  Wu Shouquan, et al. PloS one 2016 0 (6) e0157478

• CDC Information (5)
• CDC-Authored Pub (31)

• Human (0)
• Pathogen (79)

• Human (931)
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Relevant Resources

• Cancer Genomics and Epidemiology Navigator (CGEN)
• Genetics and Genomics Competencies Center (G2C2)
• NIH Genetic Testing Registry
• NIH MedGen Database
• Online Mendelian Inheritance in Man (OMIM)
• PharmGKB